Cool. it now no longer hangs up on samtools! You rock. However, now it can't find bowtie :-)
One step closer though :-)
Error, path to required bowtie2 cannot be found at ./alignReads.pl line 245.
I don't suppose there is an ubuntu script for that is there?
One step closer though :-)
Error, path to required bowtie2 cannot be found at ./alignReads.pl line 245.
I don't suppose there is an ubuntu script for that is there?
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