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any verdicts on this one? Is it doing better than Cufflinks?
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I haven't benchmarked it thoroughly yet so I don't have an answer to your second question, but one nice feature with it is that it can generate a simulated RNA-seq dataset to compare different quantifiers on (although one might not want to include RSEM itself in such a comparison). -
Yes I tried this. However, I had problems with some places that took me too long to solve. But in the end I managed to get it done. Thank you.Comment
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The field of epigenetics has traditionally concentrated more on DNA and how changes like methylation and phosphorylation of histones impact gene expression and regulation. However, our increased understanding of RNA modifications and their importance in cellular processes has led to a rise in epitranscriptomics research. “Epitranscriptomics brings together the concepts of epigenetics and gene expression,” explained Adrien Leger, PhD, Principal Research Scientist on Modified Bases...Yesterday, 07:01 AM -
Proteins are often described as the workhorses of the cell, and identifying their sequences is key to understanding their role in biological processes and disease. Currently, the most common technique used to determine protein sequences is mass spectrometry. While still a valuable tool, mass spectrometry faces several limitations and requires a highly experienced scientist familiar with the equipment to operate it. Additionally, other proteomic methods, like affinity assays, are constrained...04-04-2024, 04:25 PM
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