Hi everybody. I´m Mónica from CABIMER (SEville, Spain). I´m trying to analyze Chip-SEq Data of S. cerevisiae provided by Ion-Torrent PGM. I have used MACS in Galaxy but I get a few peaks (I have Chip & control). I´m not sure if the parameters I am using are correct. i.e. Tag (=Reads): 156, BW= 300. If i don´t use "model" I have some peaks more, but which is the "shift size" better?. Can Anyone help me? Must I use other software/algorithm?
Thanks in advance
Regards
Thanks in advance
Regards
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