Hi everyone,
I ran bwa on some data, but i don't understand the insert size estimation part.
for Example, what I see is
inferred external izise ....: 183.980 +/- 18.194
.......
inferred maximum insert size : 312 (7.04) sigma
but I'm confused , because my read length is 100bp for each end, so if the mean of external isize is 183, it means to reads coincide!!
so I'm assuming something is wrong here. can someone please help me.
Thanks,
I ran bwa on some data, but i don't understand the insert size estimation part.
for Example, what I see is
inferred external izise ....: 183.980 +/- 18.194
.......
inferred maximum insert size : 312 (7.04) sigma
but I'm confused , because my read length is 100bp for each end, so if the mean of external isize is 183, it means to reads coincide!!
so I'm assuming something is wrong here. can someone please help me.
Thanks,
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