SEQanswers

Go Back   SEQanswers > Bioinformatics > Bioinformatics
Similar Threads
Thread Thread Starter Forum Replies Last Post
vcfutils.pl -specifying minimum read depth? Lspoor Bioinformatics 3 05-27-2013 01:20 AM
Maximum read Depth in Samtools Anjali Bioinformatics 2 01-16-2012 02:15 AM
Read depth recommendations dpryan RNA Sequencing 2 09-30-2011 11:15 AM
What is read depth -D100 means in samtools? ketan_bnf Bioinformatics 1 07-28-2011 06:54 PM
About the read depth of coverage El Mariachi Illumina/Solexa 2 12-30-2010 12:22 AM

Reply
 
Thread Tools
Old 07-19-2012, 02:41 AM   #1
cmccabe
Senior Member
 
Location: chicago

Join Date: Jul 2012
Posts: 354
Default read depth

Can 20x or 40x read depth information be extracted from a BAM file for a specific region? I am not sure how to format the script. Thanks.
cmccabe is offline   Reply With Quote
Reply

Thread Tools

Posting Rules
You may not post new threads
You may not post replies
You may not post attachments
You may not edit your posts

BB code is On
Smilies are On
[IMG] code is On
HTML code is Off



All times are GMT -8. The time now is 06:44 AM.


Powered by vBulletin® Version 3.8.9
Copyright ©2000 - 2022, vBulletin Solutions, Inc.
Single Sign On provided by vBSSO