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Old 12-09-2010, 11:26 PM   #1
Chandana
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Location: Singapore

Join Date: Dec 2010
Posts: 8
Default BWA:Unique reads in seeding mode

Hi,

When seeding is enabled in BWA, if a read is marked as unique does it mean that the seed portion is uniquely mapped, like in ELAND? or is it that the whole read is uniquely mapped?
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