SEQanswers

Go Back   SEQanswers > Bioinformatics > Bioinformatics



Similar Threads
Thread Thread Starter Forum Replies Last Post
HTSeq install fatakias Bioinformatics 12 11-12-2015 08:22 AM
htseq-count paolo.kunder Bioinformatics 10 10-22-2014 05:45 AM
Problem using HTSeq pinki999 Bioinformatics 4 10-23-2012 10:40 PM
help with HTSeq installation madhuk11 Bioinformatics 4 06-07-2012 11:04 AM
in HTSeq example, pyplot hibachings2013 RNA Sequencing 0 06-29-2011 06:38 AM

Reply
 
Thread Tools
Old 07-09-2012, 12:36 PM   #1
Klroop
Junior Member
 
Location: North Carolina

Join Date: Jul 2012
Posts: 1
Default HTSeq Help

I am having major issues with installing and running HTSeq. The website instructs you to download Python, NumPy, and HTSeq to start. The to build and install both Numpy and HTSeq using the python setup.py build and python setup.py install commands. Supposedly Numpy was successful but HTSeq keeps telling me that it cannot import NumPy and asks me to download and install it again. I have tried several different versions of NumPy and none seem to be working.

Also, I am not any good with scripting and the website has an option for command line using the htseq-count command. I would love to skip everything else but it just keeps saying command cannot be found.

Help!
Klroop is offline   Reply With Quote
Reply

Thread Tools

Posting Rules
You may not post new threads
You may not post replies
You may not post attachments
You may not edit your posts

BB code is On
Smilies are On
[IMG] code is On
HTML code is Off




All times are GMT -8. The time now is 12:18 AM.


Powered by vBulletin® Version 3.8.9
Copyright ©2000 - 2021, vBulletin Solutions, Inc.
Single Sign On provided by vBSSO