Hi guys,
I have a question regarding to the filtering method of bwa mem.
I am not sure if bwa mem is able to map very short fractions (kind of local alignments) to a reference.
Actually, I know that it tries to map supermaximal exact matches (SMEMs).
Do you know more about the filtering method ?
Best,
Flo
I have a question regarding to the filtering method of bwa mem.
I am not sure if bwa mem is able to map very short fractions (kind of local alignments) to a reference.
Actually, I know that it tries to map supermaximal exact matches (SMEMs).
Do you know more about the filtering method ?
Best,
Flo