Trouble Downloading bamtools on macosx

[nickhill]

Hi all,

I am a mac osx mavericks user and have been trying to download bamtools so I can begin writing code with. I've downloaded cmake and made it so far to run cmake .. (https://github.com/pezmaster31/bamto...and-installing). Then when I run make I get:

CMake Error at CMakeLists.txt:60 (include):
include could not find load file:

/Users/nicholashill/src/new/bamtools/cmake/plugins.cmake


CMake Error at CMakeLists.txt:64 (add_subdirectory):
add_subdirectory given source "dependencies" which is not an existing
directory.


CMake Error at CMakeLists.txt:65 (add_subdirectory):
add_subdirectory given source "mash" which is not an existing directory.


CMake Error at CMakeLists.txt:66 (add_subdirectory):
add_subdirectory given source "mash-utils" which is not an existing
directory.


CMake Error at CMakeLists.txt:67 (add_subdirectory):
add_subdirectory given source "sdk" which is not an existing directory.


CMake Error at CMakeLists.txt:68 (add_subdirectory):
add_subdirectory given source "heuristics" which is not an existing
directory.


-- Configuring incomplete, errors occurred!
See also "/Users/nicholashill/src/new/bamtools/CMakeFiles/CMakeOutput.log".
make: *** [cmake_check_build_system] Error 1

Is this a problem with my original cmake configuration? I'm not sure what to do at this point.

Thanks

[GenoMax]

Are you using cmake version >= 2.6.4 as noted in the readme?

[nickhill]

When I input cmake --version I get:

cmake version 3.4.0-rc2

CMake suite maintained and supported by Kitware (kitware.com/cmake).

[GenoMax]

Error says this

include could not find load file:

/Users/nicholashill/src/new/bamtools/cmake/plugins.cmake

Is that file there? Otherwise try a re-download of bamtools.

[blancha]

Completely unhelpful, but I just installed bamtools without a hitch with Mac OS El Capitan and cmake version 3.4.0-rc2.

I don't have a subfolder called cmake in the bamtools folder.

I'm not able to reproduce your error despite my best efforts.

[nickhill]

Error says this

include could not find load file:

/Users/nicholashill/src/new/bamtools/cmake/plugins.cmake

Is that file there? Otherwise try a re-download of bamtools.

I recloned bamtools and was able to finish the download. Maybe I was unable to complete it earlier because I hadn't installed cmake first. Anyway, thanks for the help. This was an easier problem than I realized.