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Old 05-11-2009, 10:55 AM   #1
Location: Cambridge, MA

Join Date: Feb 2008
Posts: 82
Default Adapter trimming in MAQ for SOLiD

I know maq is capable of trimming 3' adapter sequences for solexa reads. I assume that the same applies to SOLiD? Do I need to provide the sequence in colorspace? or the 'maq-modified' colorspace? Anyone have experience with this? Thanks in advance.

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adapter trimming, maq, solid

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