Go Back   SEQanswers > Bioinformatics > Bioinformatics

Similar Threads
Thread Thread Starter Forum Replies Last Post
Paired-end Illumina RNA-seq adapter trimming fabrice Bioinformatics 8 01-05-2015 07:48 AM
FASTXtoolkit adapter trimming Mark Bioinformatics 36 10-24-2013 10:28 AM
Trimming or filtering the data from Solid anusha Bioinformatics 4 12-19-2012 08:00 AM
SOLiD Barcoded Adapter Trimming DrDTonge Bioinformatics 4 12-06-2011 07:33 AM
3' Adapter Trimming caddymob Bioinformatics 0 05-27-2009 12:53 PM

Thread Tools
Old 05-11-2009, 09:55 AM   #1
Location: Cambridge, MA

Join Date: Feb 2008
Posts: 82
Default Adapter trimming in MAQ for SOLiD

I know maq is capable of trimming 3' adapter sequences for solexa reads. I assume that the same applies to SOLiD? Do I need to provide the sequence in colorspace? or the 'maq-modified' colorspace? Anyone have experience with this? Thanks in advance.

lgoff is offline   Reply With Quote

adapter trimming, maq, solid

Thread Tools

Posting Rules
You may not post new threads
You may not post replies
You may not post attachments
You may not edit your posts

BB code is On
Smilies are On
[IMG] code is On
HTML code is Off

All times are GMT -8. The time now is 02:01 AM.

Powered by vBulletin® Version 3.8.9
Copyright ©2000 - 2018, vBulletin Solutions, Inc.
Single Sign On provided by vBSSO