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Old 11-30-2015, 03:11 PM   #1
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Location: usa

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Default Beagle files using the latest 1000 genomes


I am very confused...I would like to get the latest beagle files from vcf files from phase 3 version 5 of the 1000 genomes data here:

http://bochet.gcc.biostat.washington...es_phase3_v5a/, which uses these 1000 Genomes vcf files:

In particular I am trying to get something like what was available for the previous releases to create the files:


Would I need to modify the script here with the BEAGLE utilities?
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