Hi,
We are resequencing segmental duplications of high sequence identity and there is very little overlap with dbSNP in these regions. Are there any personal genomes available other than Venter's which are sequenced with clones or a different long read technology which can effectively identify variation in these regions? It would be great to have a couple of points of comparison, in addition to Venter's personal genome, to sanity check and see that SNP concordance agrees across both the whole genome and these regions. Any input would be greatly appreciated.
Thanks!
We are resequencing segmental duplications of high sequence identity and there is very little overlap with dbSNP in these regions. Are there any personal genomes available other than Venter's which are sequenced with clones or a different long read technology which can effectively identify variation in these regions? It would be great to have a couple of points of comparison, in addition to Venter's personal genome, to sanity check and see that SNP concordance agrees across both the whole genome and these regions. Any input would be greatly appreciated.
Thanks!
Comment