SEQanswers

Go Back   SEQanswers > General



Similar Threads
Thread Thread Starter Forum Replies Last Post
Can anyone explain.... beatnk96 Bioinformatics 2 11-26-2013 08:15 AM

Reply
 
Thread Tools
Old 10-15-2020, 11:25 AM   #1
mateyboy
Junior Member
 
Location: California

Join Date: Sep 2020
Posts: 3
Default Can somebody more learned than me help explain what these two questions are asking?

So I am tackling an introductory bioinformatics course and I am kind of confused on what the following questions are asking to be honest, not really asking for homework help, but to simply explain how I would go about solving these?

Here is one Q: https://imgur.com/cw2jeUc

I am not sure if I am supposed to draw 5 different trees for the 5 different positions here?

Isn't the answer WWWWW? Cos if you do 5 trees, position 10 is the most parsimonious and doesn't have any mutations but i don't know if I did this wrong...

Here is a second Q: https://imgur.com/1ebAvRW

I am given two structures here, I calculated the energy for the structure on the left using the tables provided for example at the top their is a 6 base hairpin so table shows that as 4.3 then we have UG to UA and that is -0.5 then their is a 6 base internal loop and that has 2.5 energy. Anyways I did this for the rest of structure 1 and added up all the numbers and got -2.3 so I'm pretty sure its correct.

But I am not sure how to do structure 2... Starting at the top its a 6 base hairpin no problems, then we have UG to UA and that's no problem, but then the internal loop is that a 3 base loop or a 4 base loop? Cos the C is under A I'm not sure if its included in the loop.

That's it from me guys, thanks!
mateyboy is offline   Reply With Quote
Old 11-20-2020, 03:18 AM   #2
AllisonSharp
Junior Member
 
Location: USA

Join Date: Nov 2020
Posts: 2
Default

Hello. I am very familiar with the bioinformatics course. When I was doing my internship at Massachusetts College, we had a course related to an industry perspective. Also, a long time ago I wrote a scientific paper using the service https://bestessayservicesradar.com/m...sessay-review/, so I have good knowledge. I can help you out by structuring these questions. Is it still relevant?

Last edited by AllisonSharp; 11-24-2020 at 06:30 AM.
AllisonSharp is offline   Reply With Quote
Reply

Thread Tools

Posting Rules
You may not post new threads
You may not post replies
You may not post attachments
You may not edit your posts

BB code is On
Smilies are On
[IMG] code is On
HTML code is Off




All times are GMT -8. The time now is 12:25 AM.


Powered by vBulletin® Version 3.8.9
Copyright ©2000 - 2020, vBulletin Solutions, Inc.
Single Sign On provided by vBSSO