Basically, I would like to see the frequency of pathogenic variants in a set of genes, from 1KG project.
I downloaded the corresponding area of the genome, from 1KG and ran VEP (Variant Effect Predictor) on it. However, to me VEP output neither include information about frequency nor about samples.
I hope my question is clear ! I appreciate your help,
I downloaded the corresponding area of the genome, from 1KG and ran VEP (Variant Effect Predictor) on it. However, to me VEP output neither include information about frequency nor about samples.
I hope my question is clear ! I appreciate your help,