Hello,
I'm trying to install the python module HTSeq (HTSeq-0.4.5p1.tar.gz downloaded from http://pypi.python.org/pypi/HTSeq) on our computer cluster (running redhat linux 64bit architecture, and python 2.6.3).
I came across the following error after 'setup.py build':
Any idea how to fix it?
Many thanks in advance!
Dario
I'm trying to install the python module HTSeq (HTSeq-0.4.5p1.tar.gz downloaded from http://pypi.python.org/pypi/HTSeq) on our computer cluster (running redhat linux 64bit architecture, and python 2.6.3).
I came across the following error after 'setup.py build':
Code:
tar -xzvf HTSeq-0.4.5p1.tar.gz cd HTSeq-0.4.5p1 python setup.py build running build running build_py running build_ext Traceback (most recent call last): File "setup.py", line 62, in <module> 'scripts/htseq-count', File "/exports/applications/apps/SL5/python/2.6.3/lib/python2.6/distutils/core.py", line 152, in setup dist.run_commands() File "/exports/applications/apps/SL5/python/2.6.3/lib/python2.6/distutils/dist.py", line 975, in run_commands self.run_command(cmd) File "/exports/applications/apps/SL5/python/2.6.3/lib/python2.6/distutils/dist.py", line 995, in run_command cmd_obj.run() File "/exports/applications/apps/SL5/python/2.6.3/lib/python2.6/distutils/command/build.py", line 134, in run self.run_command(cmd_name) File "/exports/applications/apps/SL5/python/2.6.3/lib/python2.6/distutils/cmd.py", line 333, in run_command self.distribution.run_command(command) File "/exports/applications/apps/SL5/python/2.6.3/lib/python2.6/distutils/dist.py", line 995, in run_command cmd_obj.run() File "build/bdist.linux-x86_64/egg/setuptools/command/build_ext.py", line 46, in run File "/exports/applications/apps/SL5/python/2.6.3/lib/python2.6/distutils/command/build_ext.py", line 340, in run self.build_extensions() File "/exports/applications/apps/SL5/python/2.6.3/lib/python2.6/distutils/command/build_ext.py", line 449, in build_extensions self.build_extension(ext) File "build/bdist.linux-x86_64/egg/setuptools/command/build_ext.py", line 175, in build_extension File "/exports/applications/apps/SL5/python/2.6.3/lib/python2.6/distutils/command/build_ext.py", line 460, in build_extension ext_path = self.get_ext_fullpath(ext.name) File "/exports/applications/apps/SL5/python/2.6.3/lib/python2.6/distutils/command/build_ext.py", line 633, in get_ext_fullpath filename = self.get_ext_filename(modpath[-1]) File "build/bdist.linux-x86_64/egg/setuptools/command/build_ext.py", line 85, in get_ext_filename KeyError: '_HTSeq' [dberaldi@frontend02 HTSeq-0.4.5p1]$
Many thanks in advance!
Dario