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02-17-2010, 02:03 PM
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#1 |
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Junior Member
Location: New York Join Date: Feb 2010
Posts: 1
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sequence reading software
Hi
I have recently been assigned a large project in which I have to go though sections of exon sequence looking for snps. Currently I am simply viewing the sequence and comparing to word documents with pasted pubmed fasta sequence and using BLAST. Does anyone know of any good sequence reading software? I have looked at a program called vardetect but would like some input before I bother learning how to use it. Also does any one have any good resources for learn bioinformatic software? (I just finished stumbling though HAPLOVIEW and that took longer than it had to) |
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02-17-2010, 11:23 PM
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#2 |
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Director at CLC bio
Location: Denmark Join Date: Aug 2008
Posts: 26
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Hi Junkfish,
For a simple, basic and free sequence viewer you might consider the CLC Sequence Viewer available at: http://clcbio.com/index.php?id=28 Cheers Roald Forsberg *****************Disclaimer - I work at CLC bio **************** |
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02-18-2010, 07:36 AM
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#3 |
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Senior Member
Location: 41°17'49"N / 2°4'42"E Join Date: Oct 2008
Posts: 323
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Try Broad's igv: http://www.broadinstitute.org/igv/
__________________
-drd |
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