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  • #1

    Seqmap34 output

    Hi Guys,

    I downloaded a RNAseq data from http://www.ncbi.nlm.nih.gov/geo/quer...?acc=GSM543645.

    You can see after sequencing it being mapped to a genome by using
    Seqmap34. I have no idea about Seqmap34 at all. Anyone happended to know Seqmap34 output description?

    I took one line here:

    HWI-EASXXX:1:60:470:949#0/1 CCTCTCCTGCTTGAGCTGCTCAAACTTCCGCTTCAG 2:1:0:0 NM_130881:Pabpc4:1530R0,NM_148917:Pabpc4:1156R0,NR_002862:EG328451:829F1

    what does each part describe?

    Thanks
    Tags: None
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