I'm new to genomics and trying to assemble a non-model genome- I want to use SOAPdenovo but I can't figure out how to get it running over my hardware options- I have an iMac which has too little RAM, and access to a UNIX cluster with lots of nodes, each with 4G RAM but can you run SOAP over a regular cluster? There doesn't seem to be a UNIX version, just Mac and Linux. Are there commands to tell SOAP the number of processors it is accessing?
From reading this site it seems like people tend to have a dedicated computer with few processors and tons of RAM, but I don't have access to anything like that. Thanks!
From reading this site it seems like people tend to have a dedicated computer with few processors and tons of RAM, but I don't have access to anything like that. Thanks!
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