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Old 02-14-2019, 11:14 AM   #1
Location: Italy

Join Date: Jul 2017
Posts: 34
Default FastQC and firefox

Hello everyone,
I want to perform a quality control of a fastq file.

so I run this line

patrizio$ fastqc --outdir raw/ raw/SRR359063_1.fastq.gz

and I have this

Analysis complete for SRR359063_1.fastq.gz

which looks fine but when I want to see the result on firefox it doesn't work,

Patrizios-MBP: processing patrizio$ firefox raw/SRR359063_1_fastqc.html

-bash: firefox: command not found

can you please tell me what the reason?

thank you
NDUFB11 is offline   Reply With Quote
Old 02-14-2019, 02:13 PM   #2
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Location: East Coast USA

Join Date: Feb 2008
Posts: 7,088

Open any web browser you like and then navigate to that html file and open it. There is nothing special about firefox.
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Old 02-15-2019, 09:49 AM   #3
Location: Italy

Join Date: Jul 2017
Posts: 34

I did it

Thank you

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