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Thread | Thread Starter | Forum | Replies | Last Post |
Per tile sequence quality - when to go back to the sequencers? | mlewis | Illumina/Solexa | 9 | 07-11-2017 10:16 PM |
Poor per tile sequence quality | cd1 | Illumina/Solexa | 4 | 06-27-2017 02:08 PM |
Variable per tile sequence quality across amplicon-seq fastqs | dross11 | Illumina/Solexa | 2 | 06-15-2017 12:58 AM |
Reason for POOR per tile sequence quality | Justin87 | Illumina/Solexa | 2 | 03-14-2017 06:37 AM |
Quality per tile | starbug | Illumina/Solexa | 0 | 09-20-2016 01:17 PM |
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#1 |
Junior Member
Location: Linux Join Date: Dec 2017
Posts: 8
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Hi again!
I have another problem with my data. FastQC returns red flag in per tile sequence quality. I see that this problem is often associated with reverse read of sequencing (in few lines). That data are representing WGS. In other files I see horizontal red line through one tile. What can I do with it? Should I remove bad tile or what? Thank you for your advices. I attached printscreen from my fastqc. |
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