Hi,
Glimmer is a collection of programs for identifying genes in microbial DNA sequences.
For running the glimmer requires 4 steps:
1. long-orfs USAGE: ./long-orfs <genome-file> [options]
2. extract Usages: extract genome_file coord_file
3. build-icm USAGE: build-icm [options]
4. glimmer3 USAGE: glimmer3 <genome-file> <icm-file> [options]
For example, I have one file named as tpall.fna. What command line I should type for running the glimmer3.0 step by step?
ps: what is the general command line that we should type to get use the Glimmer3.0 to find out the gene in microbial DNA sequences.
Thanks a lot...
Glimmer is a collection of programs for identifying genes in microbial DNA sequences.
For running the glimmer requires 4 steps:
1. long-orfs USAGE: ./long-orfs <genome-file> [options]
2. extract Usages: extract genome_file coord_file
3. build-icm USAGE: build-icm [options]
4. glimmer3 USAGE: glimmer3 <genome-file> <icm-file> [options]
For example, I have one file named as tpall.fna. What command line I should type for running the glimmer3.0 step by step?
ps: what is the general command line that we should type to get use the Glimmer3.0 to find out the gene in microbial DNA sequences.
Thanks a lot...
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