Hello. I was uncertain about whether to put this in 'General' or 'Bioinformatics' but erred on the side of the latter because it seems to get more traffic.
I am rather new to analyzing sequencing data, and am looking for a publicly available sequencing data (can be whole genome, exome, or targeted gene sequencing data) that contains information about signal intensity for each base. I do not know however what format such data would be in. I have already tried getting data from 1000genomes, specifically .bam files, and viewed them using IGV. However, this does not contain the information I'm looking for (or if it does, I couldn't find it).
After reading something I thought maybe I need data in .bcl format? In any case, how might I find (and view) public data with signal intensity at the base level? Thanks.
I am rather new to analyzing sequencing data, and am looking for a publicly available sequencing data (can be whole genome, exome, or targeted gene sequencing data) that contains information about signal intensity for each base. I do not know however what format such data would be in. I have already tried getting data from 1000genomes, specifically .bam files, and viewed them using IGV. However, this does not contain the information I'm looking for (or if it does, I couldn't find it).
After reading something I thought maybe I need data in .bcl format? In any case, how might I find (and view) public data with signal intensity at the base level? Thanks.
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