SEQanswers

Go Back   SEQanswers > Bioinformatics > Bioinformatics



Similar Threads
Thread Thread Starter Forum Replies Last Post
stringtie parameters sbcn Bioinformatics 6 02-07-2017 08:46 PM
Stringtie error tonup69 Bioinformatics 2 02-23-2016 06:33 AM
StringTie Output JazminO RNA Sequencing 2 02-03-2016 07:50 PM
Bug? duplicated genes in cufflinks output genes.expr silin284 Bioinformatics 3 05-18-2014 12:19 AM
Could Cufflinks be used for calculating RNA read abundances only? hellsingwyk Core Facilities 0 10-23-2012 09:46 PM

Reply
 
Thread Tools
Old 02-17-2017, 06:14 AM   #1
skycreative
Member
 
Location: GuangXi China

Join Date: Jan 2010
Posts: 27
Default stringtie genes abundances bug or problems?

Hi, I am using stringtie-1.3.2d.Linux_x86_64 to caculate genes abundances with -A parameter.
However, some records seems not so good.

nad4 nad4 KT428651 + 153710 155758 0.587116 0.159336 0.089332
STRG.2 - KT428651 + 153710 155758 0.587116 0.159336 0.089332

these two are at same location and same expression value, why here two records?

May I just discard the second one? Why this happen?

//bow
skycreative is offline   Reply With Quote
Reply

Tags
stringtie

Thread Tools

Posting Rules
You may not post new threads
You may not post replies
You may not post attachments
You may not edit your posts

BB code is On
Smilies are On
[IMG] code is On
HTML code is Off




All times are GMT -8. The time now is 08:07 AM.


Powered by vBulletin® Version 3.8.9
Copyright ©2000 - 2017, vBulletin Solutions, Inc.
Single Sign On provided by vBSSO