Calling de novo mutations

tracecakes · 10-22-2013, 09:17 PM

Hi all,

Is anybody familiar with calling de novo mutations from whole genome sequences of parent-offspring trios (computationally) ? I have read that samtools and VarScan can do this but I would like to hear everyones experiences.

Cheers!

Mr.Zurich1992 · 08-27-2014, 04:19 AM

Quote:

Originally Posted by tracecakes

Hi all,

Is anybody familiar with calling de novo mutations from whole genome sequences of parent-offspring trios (computationally) ? I have read that samtools and VarScan can do this but I would like to hear everyones experiences.

Cheers!

What about Golden Helix Genome Browser?

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10-22-2013, 09:17 PM	#1
tracecakes Member Location: Sydney Join Date: Jun 2013 Posts: 15	Calling de novo mutations Hi all, Is anybody familiar with calling de novo mutations from whole genome sequences of parent-offspring trios (computationally) ? I have read that samtools and VarScan can do this but I would like to hear everyones experiences. Cheers!