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05-28-2014, 09:21 AM
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#1 |
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Member
Location: Sweden Join Date: Jul 2013
Posts: 84
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Gene enrichment on cuffdiff output
Hi every body,
I have mapped my seqs with Toxedo pipeline and have my diff_out file out of cuffdiff. Now I want to do some gene enrichment analysis on it. I need some help on what to do and how to do. A bit of more detailed help since it is my first time. Any more information you need please let me know. Thanks, Parham |
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10-27-2014, 06:40 PM
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#2 | |
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Junior Member
Location: China Join Date: Oct 2014
Posts: 8
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Quote:
Hi,Parharn,have you solved the problem? |
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10-28-2014, 02:00 AM
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#3 |
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Member
Location: Sweden Join Date: Jul 2013
Posts: 84
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Hi Roger, Yes I managed to do some GO enrichment analysis and pathway analysis on it! Thanks for asking. Do you suggest anything else?
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10-28-2014, 02:05 AM
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#4 | |
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Junior Member
Location: China Join Date: Oct 2014
Posts: 8
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Quote:
http://seqanswers.com/forums/showthread.php?t=47806 Thanks, |
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