SEQanswers

Go Back   SEQanswers > Applications Forums > RNA Sequencing



Similar Threads
Thread Thread Starter Forum Replies Last Post
Problems with cuffmerge Nnogueira Bioinformatics 23 06-25-2016 10:38 PM
Cuffmerge Error ercfrtz Bioinformatics 12 05-19-2014 10:02 PM
cuffmerge problems ccstaats Bioinformatics 0 02-02-2012 05:28 AM
cuffmerge fail papori Bioinformatics 0 07-31-2011 04:01 PM
The test for cuffmerge fgh1124 Bioinformatics 5 07-28-2011 02:45 AM

Reply
 
Thread Tools
Old 03-11-2012, 07:12 AM   #1
papori
Senior Member
 
Location: berd

Join Date: Dec 2010
Posts: 181
Default cuffmerge without reference.

Hi,
i was executing cuffmerge as:
./cuffmerge -g ../refseq.gtf assembly.txt

i didnt used the reference option..(and i have one..)

Do anyone know if i should rerun it all ?!!?
or the gtf option is enough?

Thanks,
Pap
papori is offline   Reply With Quote
Reply

Thread Tools

Posting Rules
You may not post new threads
You may not post replies
You may not post attachments
You may not edit your posts

BB code is On
Smilies are On
[IMG] code is On
HTML code is Off




All times are GMT -8. The time now is 08:40 PM.


Powered by vBulletin® Version 3.8.9
Copyright ©2000 - 2021, vBulletin Solutions, Inc.
Single Sign On provided by vBSSO