Euler2 installing problem

libiyagirl · 03-28-2012, 02:23 PM

Anyone have tried Euler2 for assembly? When I was installing it, I got errors:

gcc -Iinc/ -c g_band.c
g_band.c:44: error: static declaration of 'g' follows non-static declaration
inc/extvab.h:20: error: previous declaration of 'g' was here
g_band.c:44: error: static declaration of 'h' follows non-static declaration
inc/extvab.h:20: error: previous declaration of 'h' was here
make: *** [g_band.o] Error 1

Something could be wrong with static declaration follows non-static declaration, but I don't know how to deal with it. Any suggestions?

Thanks a lot,

jimmybee · 03-28-2012, 04:27 PM

Without going specifically into your problem, I can tell you that a lot of people I know have had problems getting Euler to compile and run effectively. I've tried and given up on numerous occasions, which is a shame because in theory its great for my work. I'd love to get it going

mchaisso · 03-29-2012, 06:24 PM

Quote:

Originally Posted by jimmybee

Without going specifically into your problem, I can tell you that a lot of people I know have had problems getting Euler to compile and run effectively. I've tried and given up on numerous occasions, which is a shame because in theory its great for my work. I'd love to get it going

The development of Euler2 stopped many years ago, so you are probably stuck. What are you working on? I've been toying with the idea of developing something similar to Euler2 in my (limited) spare time.

jimmybee · 03-29-2012, 06:35 PM

I was working on complex plant genomes such as wheat and barley (90% repetitive sequence composition). I'm not doing the denovo sequencing assembly thing anymore, but I'd still like to test some of my datasets in my spare time

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03-28-2012, 02:23 PM	#1
libiyagirl Member Location: canada Join Date: Jan 2011 Posts: 27	Euler2 installing problem Anyone have tried Euler2 for assembly? When I was installing it, I got errors: gcc -Iinc/ -c g_band.c g_band.c:44: error: static declaration of 'g' follows non-static declaration inc/extvab.h:20: error: previous declaration of 'g' was here g_band.c:44: error: static declaration of 'h' follows non-static declaration inc/extvab.h:20: error: previous declaration of 'h' was here make: *** [g_band.o] Error 1 Something could be wrong with static declaration follows non-static declaration, but I don't know how to deal with it. Any suggestions? Thanks a lot,

03-28-2012, 04:27 PM	#2
jimmybee Senior Member Location: Adelaide, Australia Join Date: Sep 2010 Posts: 119	Without going specifically into your problem, I can tell you that a lot of people I know have had problems getting Euler to compile and run effectively. I've tried and given up on numerous occasions, which is a shame because in theory its great for my work. I'd love to get it going

03-29-2012, 06:35 PM	#4
jimmybee Senior Member Location: Adelaide, Australia Join Date: Sep 2010 Posts: 119	I was working on complex plant genomes such as wheat and barley (90% repetitive sequence composition). I'm not doing the denovo sequencing assembly thing anymore, but I'd still like to test some of my datasets in my spare time