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Old 07-09-2014, 02:11 AM   #1
Junior Member
Location: India

Join Date: Jul 2014
Posts: 1
Exclamation DeFuse: Error while running make command

Hello Everyone !!

I am installing a software called DeFuse [for Gene Fusion].
While running 'make' command, I am getting this error:

]# make
Command Output :

g++ -O3 -g -DDEBUG_CHECKS -I. -I../include -I../external/samtools-0.1.8 -I../external/zlib-1.2.5 -I../external/BamTools-2.0/ -I../external/BamTools-2.0/api -c -o initsplitalign.o initsplitalign.cpp
In file included from /usr/lib/gcc/x86_64-redhat-linux/4.4.7/../../../../include/c++/4.4.7/bits/stl_algobase.h:66,
from /usr/lib/gcc/x86_64-redhat-linux/4.4.7/../../../../include/c++/4.4.7/vector:61,
from Common.h:13,
from initsplitalign.cpp:8:
/usr/lib/gcc/x86_64-redhat-linux/4.4.7/../../../../include/c++/4.4.7/bits/stl_pair.h: In instantiation of ‘std:air<const int, SplitAlignment>’:
/usr/include/boost/unordered/unordered_map.hpp:392: instantiated from ‘T& boost::unordered_map<Key, T, Hash, Pred, Alloc>:perator[](const Key&) [with Key = int, T = SplitAlignment, Hash = boost::hash<int>, Pred = std::equal_to<int>, Alloc = std::allocator<std:air<const int, SplitAlignment> >]’
initsplitalign.cpp:100: instantiated from here
/usr/lib/gcc/x86_64-redhat-linux/4.4.7/../../../../include/c++/4.4.7/bits/stl_pair.h:84: error: using invalid field ‘std:air<_T1, _T2>::second’
make: *** [initsplitalign.o] Error 1

Do anyone has an idea, why I am getting this error and how can I solve it ??
( I have attaced full error OUTPUT - filename : "error_of_make.txt" )

Thanx in advance,
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File Type: txt error_of_make.txt (5.1 KB, 2 views)

Last edited by neoanderson007; 07-09-2014 at 02:14 AM. Reason: It is taking the file content as an HTML content
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