Go Back   SEQanswers > Bioinformatics > Bioinformatics

Similar Threads
Thread Thread Starter Forum Replies Last Post
Targeted Genome Assembly for region poorly represented in reference genome? gumbos Bioinformatics 1 01-09-2012 05:01 PM
Please help: imperfect reference genome/get consensus on genome/read alignment? KAP Bioinformatics 1 08-19-2011 08:14 AM
transferring annotations from reference genome to the resequenced genome mike.t Bioinformatics 1 09-17-2010 06:35 AM
Reference genome bair Bioinformatics 10 07-18-2010 09:49 PM
Reference genome for MAQ - split reference genome by chromosome or not? inesdesantiago Bioinformatics 4 02-18-2009 09:44 AM

Thread Tools
Old 07-30-2008, 02:33 PM   #1
Junior Member
Location: usa

Join Date: Dec 2007
Posts: 5
Default Reference Genome


I have data in FASTQ format from the Illumina 1G Analyzer. I wish to analyze it with Maq. The library represents gene expression TAGs derived from mouse mRNA.

I need to find a mouse reference in FASTA format. I could use either total genomic or a gene expression or transcriptome set.

Can anyone suggest where to download the reference files.

Thank you, CM
Macki1x is offline   Reply With Quote
Old 07-30-2008, 05:58 PM   #2
Senior Member
Location: The University of Melbourne, AUSTRALIA

Join Date: Apr 2008
Posts: 275

All the standard places:
Torst is offline   Reply With Quote

Thread Tools

Posting Rules
You may not post new threads
You may not post replies
You may not post attachments
You may not edit your posts

BB code is On
Smilies are On
[IMG] code is On
HTML code is Off

All times are GMT -8. The time now is 03:50 PM.

Powered by vBulletin® Version 3.8.9
Copyright ©2000 - 2021, vBulletin Solutions, Inc.
Single Sign On provided by vBSSO