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Old 02-27-2016, 05:36 AM   #1
Location: Switzerland

Join Date: May 2013
Posts: 20
Default IGV genome browser

How I can see all de novo mutation with IGV browser when comparing with parents genomes?

Is there a menu for this operation.
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Old 02-27-2016, 06:49 AM   #2
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Location: East Coast USA

Join Date: Feb 2008
Posts: 7,087

Have you called SNPs on the aligned data? You can use the VCF file from that operation to visualize the mutations you want to see in IGV.
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