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Thread | Thread Starter | Forum | Replies | Last Post |
MACS version 1.3.0 versus MACS version 1.4.0 | neetu | Bioinformatics | 1 | 11-24-2011 04:13 AM |
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MACS peaks | VeenaV | Bioinformatics | 2 | 11-10-2010 09:46 AM |
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#1 |
Member
Location: Oslo Join Date: Dec 2010
Posts: 15
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Hi
I wounder how MACS score the peaks. When you run MACS you get a output peaks.bed, this file include chromosome, start, stop, peaknumber and a score. How does MACS create this score? Does the length of the peak affect the score value? Thanks |
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#2 |
ng
Location: LA Join Date: May 2008
Posts: 78
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is it really the score in the last column of the "NAME_peaks.bed" file?
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