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Old 06-24-2013, 11:26 AM   #1
AniS
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Location: NM

Join Date: Jun 2013
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Default DeSeq PlotPCA

Hi Fellow DeSeq users,

I have used DeSeq for a few of my expression analyses and was trying to plot a PCA graph (for sample clustering) with the same.

Here is the command i used:


print(plotPCA(vsdFull))

I am getting the following error:

Please give the x-coordinate for a legend.plotPCA
Please give the y-coordinate for a legend.

Has anyone seen this before? Please let me know as I am not that proficient with the package yet and would appreciate any input from you.

Thanks in advance
AniS
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Old 09-01-2013, 12:42 PM   #2
dan
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Default

Hi AniS, I suspect you've posted in the wrong forum, but... You could try asking your question in an email to the contact address for DESeq listed here:
http://seqanswers.com/wiki/DESeq
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