Hello,
I have a Miseq Barcode library run that I am trying to use idemp to demultiplex using the I1.fastq index file from the instrument. However, the read names do not match up to my R1 read set:
Read names are different at read 17393140 between files
AF015_S1_L001_I1_001.fastq AF015_S1_L001_R1_001.fastq
M04872:20:000000000-BH9GY:1:2114:17482:28493
M04872:20:000000000-BH9GY:1:2114:17481:28493
Any reason for this? And how to fix it?
I have a Miseq Barcode library run that I am trying to use idemp to demultiplex using the I1.fastq index file from the instrument. However, the read names do not match up to my R1 read set:
Read names are different at read 17393140 between files
AF015_S1_L001_I1_001.fastq AF015_S1_L001_R1_001.fastq
M04872:20:000000000-BH9GY:1:2114:17482:28493
M04872:20:000000000-BH9GY:1:2114:17481:28493
Any reason for this? And how to fix it?
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