I just tried to use 'shore import' from the SHORE pipline to import some paired end fastq files and I get this error message
stream conversion failed for "890/1": trailing characters
This seems very odd as it's perfectly expected that paired end read IDs will have a trailing /1 or /2. Does anyone know if I need to strip the trailing read pair tags? The import worked fine for a single end read file.
stream conversion failed for "890/1": trailing characters
This seems very odd as it's perfectly expected that paired end read IDs will have a trailing /1 or /2. Does anyone know if I need to strip the trailing read pair tags? The import worked fine for a single end read file.
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