SEQanswers

Go Back   SEQanswers > Applications Forums > RNA Sequencing



Similar Threads
Thread Thread Starter Forum Replies Last Post
transcripts missing from cufflinks djm2007 RNA Sequencing 3 05-29-2013 11:39 PM
Cufflinks not IDing transcripts correctly egunth RNA Sequencing 0 02-10-2012 09:20 AM
RNA-Seq: Identification of novel transcripts in annotated genomes using RNA-Seq. Newsbot! Literature Watch 0 06-29-2011 01:40 PM
Visualizing novel transcripts through cufflinks adrian Bioinformatics 0 06-13-2011 08:07 AM
transcripts by cufflinks and cuffdiff mrfox Bioinformatics 1 11-22-2010 05:44 PM

Reply
 
Thread Tools
Old 12-06-2011, 12:29 AM   #1
magarolo
Junior Member
 
Location: Köln, Germany

Join Date: Aug 2011
Posts: 4
Default Cufflinks Annotated Transcripts

Hello All,

Maybe this question has been asked already, but I was wondering if someone may know where can I get the information of exons, introns, or strand direction in the cufflinks annotated transcripts. After I finished my analysis, I got several Cufflinks generated transcripts, I know where is the start and end position; howver, I do not know if it does have introns or what is the strand (Forward or Reverse). Any clues??

Thanks for your help!
magarolo is offline   Reply With Quote
Old 12-08-2011, 01:34 AM   #2
mith_lev20
Junior Member
 
Location: cambridge

Join Date: Dec 2011
Posts: 2
Default Re:

Here you can get info about thi :

http://www.bookrags.com/research/exons-and-introns-wog/
mith_lev20 is offline   Reply With Quote
Reply

Thread Tools

Posting Rules
You may not post new threads
You may not post replies
You may not post attachments
You may not edit your posts

BB code is On
Smilies are On
[IMG] code is On
HTML code is Off




All times are GMT -8. The time now is 07:03 PM.


Powered by vBulletin® Version 3.8.9
Copyright ©2000 - 2019, vBulletin Solutions, Inc.
Single Sign On provided by vBSSO