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  • Single cell RNAseq _ Transcriptome sequence

    I have data which has ben generated from Single cells (Stem cells/ cancer cells), I was wondering if some one has work flow for such anlaysis or any open source tools if some one has tested the tool.

    Thanks

  • #2
    single cell RNA seq

    Any suggestion or experience to share on this?

    Comment


    • #3
      Use Galaxy:


      There are easy video tutorials for beginners, also nice document and support too!

      Have fun

      Comment


      • #4
        Single cell RNA-seq

        I use Galaxy a lot, Could you please specify which tool you are referring to for Single cell RNA-seq. Am I missing something?

        Comment


        • #5
          This might be helpful:
          Galaxy is a community-driven web-based analysis platform for life science research.


          Could you be more specific? What kind of analysis you like to do?

          Comment


          • #6
            How did you make the single cell RNA-Seq library? We have problems going below 20 cells.

            Comment

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