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Old 11-10-2020, 06:04 AM   #1
floydian_slip
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Location: RTP

Join Date: Jun 2012
Posts: 9
Default get rsID or positions from variant name/gene info

Hi,
I have a list of variant and gene info as follows:

MCOLN1 c.406-2A>G
G6PC c.247C>T
PCDH15 c.733C>T
CLRN1 c.144T>G
NEB c.7431+1917_7536+372del

I would like to either get rsIDs or preferably their coordinates in hg19/GRCh37.
Is there a straight forward way of doing this? I have 100s of such entries hence manually not possible.
Thanks so much in advance.
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clinvar, dbsnp, rsid, variant analysis, variant filtering

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