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05-21-2011, 06:38 PM
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Member
Location: UK Join Date: Feb 2011
Posts: 11
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Consensus sequence
I compare some 454 reads with a reference genome using blastn with ungapped alignment. I have converted the blast reslts into fasta format. Now I want to convert the reads (output of blast) into consensus sequence. I tried the bioperl module Bio::SimpleAlign but that didn't work. Need some suggestions......
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