Go Back   SEQanswers > Bioinformatics > Bioinformatics

Similar Threads
Thread Thread Starter Forum Replies Last Post
plink files to vcf conversion Vanisha Bioinformatics 10 03-13-2017 11:48 PM
haploview using plink files Rabu Bioinformatics 0 11-04-2015 06:38 AM
Non-C methylation in Bismark .cov files bedward1 Epigenetics 5 02-04-2015 04:42 AM
convert plink files to VCF fadista General 0 11-29-2012 04:30 PM
vcf to plink format conversion problems pepsimax Bioinformatics 0 11-28-2012 08:29 AM

Thread Tools
Old 11-15-2019, 05:20 PM   #1
Junior Member
Location: Birmingham

Join Date: Nov 2019
Posts: 3
Default Problems understanding .cov files in Plink

Iím doing a GWAS using plink and Iím trying to write a covariant file. I can't get my head around the format of a covariant file or even how to write one, could you please explain it to me? How would I write a covariant file including sex and 10 principal components with plink in a Linux command line? I know this is trivial but i'm new to bioinformatics.
Pbro90 is offline   Reply With Quote

bioinformactics, gwas, linux, plink

Thread Tools

Posting Rules
You may not post new threads
You may not post replies
You may not post attachments
You may not edit your posts

BB code is On
Smilies are On
[IMG] code is On
HTML code is Off

All times are GMT -8. The time now is 09:03 AM.

Powered by vBulletin® Version 3.8.9
Copyright ©2000 - 2021, vBulletin Solutions, Inc.
Single Sign On provided by vBSSO