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Old 04-28-2014, 12:42 PM   #1
Geneious
Registered Vendor
 
Location: New Zealand

Join Date: Jul 2010
Posts: 22
Default Geneious - circular & iterative mapping, phased SNP variant effects, and more

We've made a short video demonstrating some of the cool things you can do in Geneious (http://www.geneious.com) that as far as we're aware either aren't available or aren't as well implemented in other software. The full 7 minute video is at https://www.youtube.com/watch?v=D5ZB8j4mxBI but a condensed version of the features most relevant to this site (e.g. circular reference sequence mapping, iterative mapping, coverage overview graph, phased SNP variant effects, nice indel visualisation) is at https://www.youtube.com/watch?v=IOGmxjK3f_4

Note that Geneious is commercial software. Some of the features demonstrated (e.g. nice indel visualization, hiding columns over x% gaps, coverage overview graph) are available in the free (unlicensed) version of Geneious. The other features can be used in the fully functional version which has a two week trial in case you feel like trying them out on your own data sets.
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circular assembly, indel, iterative mapping, snp analysis

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