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Old 02-03-2016, 07:36 AM   #1
Location: Maryland, USA

Join Date: May 2012
Posts: 60
Default Computational Karyotyping of non-model species genomes


I have some nice long read data for a diploid animal. There are no references species or even genera in this group and the karyotypes vary widely (from 12 to 50+ chromosomes).

Is there a way to get an estimate just using a de novo assembly of the number of chromosomes in this organism?
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de novo assembly, karyotype, non-model organism

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