SEQanswers

Go Back   SEQanswers > Bioinformatics > Bioinformatics



Similar Threads
Thread Thread Starter Forum Replies Last Post
Strand-specific library appears not strand-specific oligo Illumina/Solexa 7 12-08-2011 09:54 AM
Strand specificity Marcel RNA Sequencing 0 09-22-2011 06:13 AM
always reads on plus strand more than on minus strand tujchl Bioinformatics 4 04-29-2011 12:08 AM
different number of reads mapped to plus strand and minus strand gfmgfm Bioinformatics 2 02-03-2011 10:26 AM
RNA-Seq: Multimodal RNA-seq using single-strand, double-strand, and CircLigase-based Newsbot! Literature Watch 0 12-24-2010 02:13 AM

Reply
 
Thread Tools
Old 01-26-2011, 05:25 AM   #1
madsaan
Member
 
Location: california

Join Date: Jan 2011
Posts: 26
Question undetermined strand

Hi,


Everytime I run cuffcompare with reference gff file and the transcripts.gtf from cufflinks I get a warning saying "found 6004 transcripts with undetermined strands" .What does it mean?

Thanks,
Joji
madsaan is offline   Reply With Quote
Reply

Thread Tools

Posting Rules
You may not post new threads
You may not post replies
You may not post attachments
You may not edit your posts

BB code is On
Smilies are On
[IMG] code is On
HTML code is Off




All times are GMT -8. The time now is 05:06 AM.


Powered by vBulletin® Version 3.8.9
Copyright ©2000 - 2020, vBulletin Solutions, Inc.
Single Sign On provided by vBSSO