Seqanswers Leaderboard Ad

Collapse

Announcement

Collapse
No announcement yet.
X
 
  • Filter
  • Time
  • Show
Clear All
new posts

  • Gviz Installation

    Hello I am using R 3.2.3 on ubuntu 16.04 LTS and I can't the R package Gviz

    I have done the following:

    source("https://bioconductor.org/biocLite.R")

    biocLite("Gviz")

    I think the problem is with biovizBase and when I try to install that I get the following warnings and error messages

    biocLite("biovizBase")

    Warning: multiple methods tables found for ‘unlist’

    Warning: replacing previous import by ‘S4Vectors::unlist’ when loading ‘biovizBase’
    Warning: replacing previous import by ‘S4Vectors::unlist’ when loading ‘IRanges’
    Error : Functions found when exporting methods from the namespace ‘IRanges’ which are not S4 generic: ‘which.max’, ‘which.min’
    ERROR: lazy loading failed for package ‘biovizBase’
    * removing ‘/usr/local/lib/R/site-library/biovizBase’

    The downloaded source packages are in
    ‘/tmp/RtmpVEQwqp/downloaded_packages’
    Warning message:
    In install.packages(pkgs = doing, lib = lib, ...) :
    installation of package ‘biovizBase’ had non-zero exit status

    What should I do to install Gviz and biovizBase?

    Thanks Peder

Latest Articles

Collapse

  • seqadmin
    Recent Advances in Sequencing Analysis Tools
    by seqadmin


    The sequencing world is rapidly changing due to declining costs, enhanced accuracies, and the advent of newer, cutting-edge instruments. Equally important to these developments are improvements in sequencing analysis, a process that converts vast amounts of raw data into a comprehensible and meaningful form. This complex task requires expertise and the right analysis tools. In this article, we highlight the progress and innovation in sequencing analysis by reviewing several of the...
    05-06-2024, 07:48 AM
  • seqadmin
    Essential Discoveries and Tools in Epitranscriptomics
    by seqadmin




    The field of epigenetics has traditionally concentrated more on DNA and how changes like methylation and phosphorylation of histones impact gene expression and regulation. However, our increased understanding of RNA modifications and their importance in cellular processes has led to a rise in epitranscriptomics research. “Epitranscriptomics brings together the concepts of epigenetics and gene expression,” explained Adrien Leger, PhD, Principal Research Scientist...
    04-22-2024, 07:01 AM

ad_right_rmr

Collapse

News

Collapse

Topics Statistics Last Post
Started by seqadmin, Yesterday, 06:57 AM
0 responses
11 views
0 likes
Last Post seqadmin  
Started by seqadmin, 05-06-2024, 07:17 AM
0 responses
16 views
0 likes
Last Post seqadmin  
Started by seqadmin, 05-02-2024, 08:06 AM
0 responses
19 views
0 likes
Last Post seqadmin  
Started by seqadmin, 04-30-2024, 12:17 PM
0 responses
24 views
0 likes
Last Post seqadmin  
Working...
X