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  • BWA index error

    Hi,

    I was trying to index the hg19 genome, but get an error:

    $ bwa index -a bwtsw /UCSC/human/hg19.fa
    [bwa_index] Pack FASTA... [bns_fasta2bntseq] fail to open file '/UCSC/human/hg19.fa.pac' : Permission denied

    I checked the file permissions for hg19.fa and they look ok. Am I doing something wrong?

    thanks!

  • #2
    ok, nevermind. My mistake!

    Comment

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