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Old 12-26-2009, 01:19 PM   #1
Location: Pune, India

Join Date: Apr 2008
Posts: 21
Default FASTA to ACE

I still receive a fair number of PMs and emails in response to this posting which means people are interested in a tool that converts a FASTA formatted file along with a read alignment file from ELAND or similar to ACE for viewing with Eagleview. I am releasing the script I wrote as source code for anyone to tinker with as a sourceforge project. Feel free to make it more usable. There are issues with the script as it is which I can describe in more detail if people are interested.
Farhat Habib
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Old 07-08-2011, 05:58 AM   #2
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Location: Exeter, UK

Join Date: Jul 2011
Posts: 3


AKash this side. I am doing master's in Bioinformatics and currently working on my project. I have to use Euler for short read sequences, but I don't know how to use it. So please, can anyone help me to understand how to work with Euler and how to write a command to input the sequences?

ac422 is offline   Reply With Quote

eagleview, fasta2ace, format conversion

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