Any one knew how to deal with this problem ?
Thanks!
$ perl summarize_annovar.pl -buildver hg19 653_snps.avinput -outfile 653_snps ./humandb
NOTICE: the --ver1000g argument is set as '1000g2010nov' by default
NOTICE: Running step 1 with system command <annotate_variation.pl -geneanno -buildver hg19 -dbtype refgene -outfile 653_snps -exonsort 653_snps.avinput ./humandb>
Error running system command: <annotate_variation.pl -geneanno -buildver hg19 -dbtype refgene -outfile 653_snps -exonsort 653_snps.avinput ./humandb>
Thanks!
$ perl summarize_annovar.pl -buildver hg19 653_snps.avinput -outfile 653_snps ./humandb
NOTICE: the --ver1000g argument is set as '1000g2010nov' by default
NOTICE: Running step 1 with system command <annotate_variation.pl -geneanno -buildver hg19 -dbtype refgene -outfile 653_snps -exonsort 653_snps.avinput ./humandb>
Error running system command: <annotate_variation.pl -geneanno -buildver hg19 -dbtype refgene -outfile 653_snps -exonsort 653_snps.avinput ./humandb>