Hi all,
We are sequencing the genome of a microscopic invertebrate. Our assembly has significant bacterial contamination that we would like to remove prior to gene modelling. Is anyone aware of a publicly available tool that includes diverse bacterial genomes as references that I could use to annotate my contigs as either bacterial or eukaryotic?
Thanks!
Kevin
We are sequencing the genome of a microscopic invertebrate. Our assembly has significant bacterial contamination that we would like to remove prior to gene modelling. Is anyone aware of a publicly available tool that includes diverse bacterial genomes as references that I could use to annotate my contigs as either bacterial or eukaryotic?
Thanks!
Kevin
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