I managed somehow to get frg files and so on.
But after this instruction:
./pacBioToCA -length 500 -partitions 200 -l pacbio -t 16 -s pacbio.spec -fastq pacbio.filtered_subreads.fastq illumina.frg > run.out
The file is empty. How can I solve this?
But after this instruction:
./pacBioToCA -length 500 -partitions 200 -l pacbio -t 16 -s pacbio.spec -fastq pacbio.filtered_subreads.fastq illumina.frg > run.out
The file is empty. How can I solve this?
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