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Old 02-25-2013, 12:18 AM   #1
gauravamit
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Location: India

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Default Full statistics regarding contig file

We have contigstat.pl, but it provides only total contigs count and total N50 values for all contigs etc. But I want to know the full statistics regarding my contig file.

In short, I want information for each contig in my contig file. Can anyone help me in this regard?
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Old 10-03-2013, 05:40 AM   #2
earonesty
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Quote:
Originally Posted by gauravamit View Post
We have contigstat.pl, but it provides only total contigs count and total N50 values for all contigs etc. But I want to know the full statistics regarding my contig file.

In short, I want information for each contig in my contig file. Can anyone help me in this regard?
I use this:

https://code.google.com/p/ea-utils/s...r/contig-stats

which is more thorough.

What info do you want per contig, I can add it:

id,length, gc percent, .... ?
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