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Old 05-12-2011, 07:15 AM   #1
johnsequence
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Location: california

Join Date: Jan 2010
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Default GEO sequence count

Hello, anyone

It is an easy question, but I do not know. How can I use the GEO sequence count file that can be downloaded from GEO raw file? The file format contains two columns, first is sequence, second is count, like ATGCTCCCTTAA 2340. Do I need realign them back to genome or directly use them? Thanks.
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